The detailed information of tRNA gene sequence


Sequence ID>WENV170017972
Genome IDBARV01001968
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 484
End posion on genome 575
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcaggattta
tRNA gene sequence 
GGAGGGATCGCATAGTGGCCTAGTGCGGGCGCCTGCTAAGCGCTTACCCTGAGAAATCGG
GGTCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
tgtttaatat
Secondary structure (Cloverleaf model)
>WENV170017972	Ser	GCT
                   a      GCCA tgtttaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TACCCTGAGAAATCGGGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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