The detailed information of tRNA gene sequence


Sequence ID>WENV170017975
Genome IDBARV01002122
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1282
End posion on genome 1355
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
attccacttt
tRNA gene sequence 
TGGGGAGTCGTCTAGTGGTAGGACGGTGGACTCTGAATCCGCAAGCAGAGGTTCGAATCC
TCTCTCCCCAGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170017975	Gln	CTG
                   t      GCCA nnnnnnnnnn
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
        G A        C      | | | | |     G
      T     T C T G       A G A G G     C
      G     + | | |                 T T
      G     G G A C
        T A        G     AAGC
                    G - C
                    T + G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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