The detailed information of tRNA gene sequence


Sequence ID>WENV170017977
Genome IDBARV01002210
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 691
End posion on genome 605
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctataagcaa
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTTGATGGTGCCGCTCTCGAAAAGCGGTGGGCAGCAATTGCCT
CGTGGGTTCGAATCCCACCCTCTCCGCgg
Downstream region at tRNA end position 
agaggtgctg
Secondary structure (Cloverleaf model)
>WENV170017977	Ser	CGA
                   a      GCgg agaggtgctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G       + | | |                 T T
    T       T G G T
      T G A        G     TGGGCAGCAATTGCCTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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