The detailed information of tRNA gene sequence


Sequence ID>WENV170017979
Genome IDBARV01002256
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 919
End posion on genome 1010
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaaattgcg
tRNA gene sequence 
GGAGAGGTGACTGAGTGGTTGAAAGTGCACGATTGGAAATCGTGTAGGGGGTTAAAGCCT
CCTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ctgcaaccaa
Secondary structure (Cloverleaf model)
>WENV170017979	Ser	GGA
                   g      GCCA ctgcaaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C A       G A G G G     C
    G         | | |                 T T
    T       A A G T
      T G A        G     TAGGGGGTTAAAGCCTCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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