The detailed information of tRNA gene sequence


Sequence ID>WENV170017980
Genome IDBARV01002262
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 627
End posion on genome 699
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcccgctat
tRNA gene sequence 
GGGCTCGTAGCTCAGTGGCAGAGCGGGCGGCTCATAACCGCTTGGTCGTAGGTTCGAATC
CTGCCGAGCCCACtc
Downstream region at tRNA end position 
agtttattta
Secondary structure (Cloverleaf model)
>WENV170017980	Met	CAT
                   t      ACtc agtttattta
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        A      | + | | |     G
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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