The detailed information of tRNA gene sequence


Sequence ID>WENV170017984
Genome IDBARV01002411
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 91
End posion on genome 2
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttcaaatcc
tRNA gene sequence 
AGAGGGGTGTCCGAGTGGTCTATGGTGACGGTCTTGAAAACCGTTGTCCCCGCAAGGGGA
CCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
cnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170017984	Ser	TGA
                   c      GCCA cnnnnnnnnn
                     A   C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    T       T G G T
      C T A        G     TGTCCCCGCAAGGGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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