The detailed information of tRNA gene sequence


Sequence ID>WENV170017987
Genome IDBARV01002509
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 410
End posion on genome 323
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgacaaaaaa
tRNA gene sequence 
GGAAGGGTGCCGGAGCGGTTCAACGGGATGGCTTGGAAAGCCATGACCTTTCGGGGTCTC
GTGGGTTCAAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
cattgtacac
Secondary structure (Cloverleaf model)
>WENV170017987	Ser	GGA
                   a      GCCA cattgtacac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T C A        G     GACCTTTCGGGGTCTC
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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