The detailed information of tRNA gene sequence


Sequence ID>WENV170017988
Genome IDBARV01002636
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 675
End posion on genome 601
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttcctcat
tRNA gene sequence 
GGGCTCGTAGCTCAGCGGCAGAGCGGCCGGCTCATAACCGGTTGGTCGCAGGTTCGAATC
CTGCCGAGCCCACCA
Downstream region at tRNA end position 
gttatcttgc
Secondary structure (Cloverleaf model)
>WENV170017988	Met	CAT
                   t      ACCA gttatcttgc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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