The detailed information of tRNA gene sequence


Sequence ID>WENV170017989
Genome IDBARV01002744
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 325
End posion on genome 413
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agttaacctg
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTTTATGGTGACGGTCTTGAAAACCGTTCTCGCCTATGGCGAG
CGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ccatccttga
Secondary structure (Cloverleaf model)
>WENV170017989	Ser	TGA
                   g      GCCA ccatccttga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    T       T G G T
      T T A        G     TCTCGCCTATGGCGAGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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