The detailed information of tRNA gene sequence


Sequence ID>WENV170017992
Genome IDBARV01002773
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 77
End posion on genome 2
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttaaacaggt
tRNA gene sequence 
GGGGCTGTAGCTCAATCGGGAGAGCGTTTGACTGGCAGTCAAAAGGTAGTGGGTTCGAAT
CCCATCAGCTCCACCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170017992	Ala	GGC
                   t      ACCA annnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T A C C C     A
      T A A        A      + | | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTA
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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