The detailed information of tRNA gene sequence


Sequence ID>WENV170017998
Genome IDBARV01003144
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 929
End posion on genome 1020
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgattggt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAGGCGCACGCTTGGAAAGCGTGTAAGTGGCGTAAGCTG
CTTCGAGGGTTCAAATCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
taaagttacc
Secondary structure (Cloverleaf model)
>WENV170017998	Ser	GGA
                   t      ACCA taaagttacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G A G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TAAGTGGCGTAAGCTGCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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