The detailed information of tRNA gene sequence


Sequence ID>WENV170017999
Genome IDBARV01003144
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 462
End posion on genome 369
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagatagtgt
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCGAAAGCGCTCGACTCGAAATCGAGTGTACTGCCAGAAGC
AGTACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tgaagatact
Secondary structure (Cloverleaf model)
>WENV170017999	Ser	CGA
                   t      GCCA tgaagatact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           | | |                 T T
  T         A A G C
    C G A          G     TGTACTGCCAGAAGCAGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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