The detailed information of tRNA gene sequence


Sequence ID>WENV170018000
Genome IDBARV01003285
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1017
End posion on genome 1089
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttaggcggt
tRNA gene sequence 
GGCAGCGTAGCTCAGTGGTAGAGCAGAGGACTCATAAGCCTTTGGTCGTGGGTTCAAATC
CCTCCGCTGCCACtt
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170018000	Met	CAT
                   t      ACtt tnnnnnnnnn
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
        G A        A      |   | | |     A
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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