The detailed information of tRNA gene sequence


Sequence ID>WENV170018004
Genome IDBARV01003668
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 987
End posion on genome 911
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atatgatttt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTTAGAGCGCTTGCTTCACACGCAAGAGGTCAGAGGTTCAAG
TCCCCTACCGCCCACCA
Downstream region at tRNA end position 
ccgtgtacag
Secondary structure (Cloverleaf model)
>WENV170018004	Val	CAC
                   t      ACCA ccgtgtacag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T C C C C     A
      T G A        A      | |   | |     A
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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