The detailed information of tRNA gene sequence


Sequence ID>WENV170018012
Genome IDBARV01004419
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1
End posion on genome 88
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGCCGATCAGGCGCGCCTGGAGAGCGCGTGTCGCCTTGGCGACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gaataaccaa
Secondary structure (Cloverleaf model)
>WENV170018012	Ser	GGA
                   n      GCCA gaataaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    C       T C A G
      C G A        G     TGTCGCCTTGGCGACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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