The detailed information of tRNA gene sequence


Sequence ID>WENV170018020
Genome IDBARV01005245
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 132
End posion on genome 39
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actttaaaac
tRNA gene sequence 
GGAGAGATGACCGAGAGGCCGAAGGTGGTTGCCTGCTAAGCAATTGAGCGGGTATAAACC
TGCTCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttttaggtg
Secondary structure (Cloverleaf model)
>WENV170018020	Ser	GCT
                   c      GCCA gttttaggtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGAGCGGGTATAAACCTGCTCC
                    G + T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK