The detailed information of tRNA gene sequence


Sequence ID>WENV170018021
Genome IDBARV01005264
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 301
End posion on genome 230
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aacaaatctt
tRNA gene sequence 
GGGCCCGTAGTTTAACGGCAAAACGCTACATTCGCATTGTAGAAATGGCAGTTCGATTCT
GCCTGGGTCCACat
Downstream region at tRNA end position 
gagttcaaaa
Secondary structure (Cloverleaf model)
>WENV170018021	Ala	CGC
                   t      ACat gagttcaaaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G + T          T T
                    T     C C G T C     A
        A A        A      | | | | |     G
      C     T T T G       G G C A G     C
      G     | | | |                 T T
      G     A A A C
        C A        G     AAAT
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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