The detailed information of tRNA gene sequence


Sequence ID>WENV170018024
Genome IDBARV01005552
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 518
End posion on genome 432
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatctatttt
tRNA gene sequence 
GGAGAGGTCGGATAATTGGTTATTCCACCAGTCTTGAAAACTGGAGTCCTGAAAAGGACT
TGTGGGTTCGAGTCCCACCCTCTCCGCat
Downstream region at tRNA end position 
ttaaaaacag
Secondary structure (Cloverleaf model)
>WENV170018024	Ser	TGA
                   t      GCat ttaaaaacag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C A C C C     A
      T A A        C      | | | | |     G
    T       T A G G       G T G G G     C
    G         | | |                 T T
    G       T T C C
      T T A        A     AGTCCTGAAAAGGACTT
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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