The detailed information of tRNA gene sequence


Sequence ID>WENV170018031
Genome IDBARV01006279
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 388
End posion on genome 313
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttgaaactag
tRNA gene sequence 
GGGGCTGTAGTTCAATTGGGAGAGCGTTTGACTGGCAGTCAAAAGGTAGAGGGTTCGAAT
CCCTCCAGCTCCACCA
Downstream region at tRNA end position 
agtcaaactt
Secondary structure (Cloverleaf model)
>WENV170018031	Ala	GGC
                   g      ACCA agtcaaactt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T A A        A      | | | | |     G
    T       C T T G       G A G G G     C
    G       | | + |                 T T
    G       G A G C
      G A          G     AGGTA
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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