The detailed information of tRNA gene sequence


Sequence ID>WENV170018037
Genome IDBARV01006416
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1165
End posion on genome 1092
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tataatgttt
tRNA gene sequence 
GGTGCCATAGCTCAGTTGGTAGAGCACAGGACTGAAAATCCTGGTGTCCGTGGTTCGATT
CCGCGTGGCACCACgt
Downstream region at tRNA end position 
ccttaaatgt
Secondary structure (Cloverleaf model)
>WENV170018037	Phe	GAA
                   t      ACgt ccttaaatgt
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     A - T          T T
                    T     G C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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