The detailed information of tRNA gene sequence


Sequence ID>WENV170018040
Genome IDBARV01006478
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 196
End posion on genome 272
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tgcccaccct
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTAAGAGTGTCGCTTTGACATAGCGGAGGTCACAGGTTCAAC
TCCTGTCGCGCCCACTA
Downstream region at tRNA end position 
aataaaaata
Secondary structure (Cloverleaf model)
>WENV170018040	Val	GAC
                   t      ACTA aataaaaata
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T C
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      T A A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    T - A
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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