The detailed information of tRNA gene sequence


Sequence ID>WENV170018050
Genome IDBARV01006907
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 640
End posion on genome 716
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagataaagt
tRNA gene sequence 
AGGCCTGTAGCTCAATTGGTTAGAGTAGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGAG
TCCCTCCAGGCCTGCCA
Downstream region at tRNA end position 
gcttaatctc
Secondary structure (Cloverleaf model)
>WENV170018050	Trp	CCA
                   t      GCCA gcttaatctc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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