The detailed information of tRNA gene sequence


Sequence ID>WENV170018065
Genome IDBARV01008429
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 533
End posion on genome 461
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gttattcttc
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGCAGAGCGATAGGTTCGCAATCTATAGGTCAGGGGTTCAAAT
CCCCTATCCTCCAgga
Downstream region at tRNA end position 
aaagcttcag
Secondary structure (Cloverleaf model)
>WENV170018065	Ala	CGC
                   c      Agga aaagcttcag
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    A - T
                    T - A
                    A - T
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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