The detailed information of tRNA gene sequence


Sequence ID>WENV170018068
Genome IDBARV01008769
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 130
End posion on genome 206
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcccctggt
tRNA gene sequence 
GGGGTCGTAGTTCAGATGGATAGAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCAAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ccttaccagc
Secondary structure (Cloverleaf model)
>WENV170018068	Asp	GTC
                   t      GCCA ccttaccagc
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      A G A        A      + | | | |     A
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      A T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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