The detailed information of tRNA gene sequence


Sequence ID>WENV170018070
Genome IDBARV01009028
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 681
End posion on genome 770
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tattcggaat
tRNA gene sequence 
GGAAGGATGGGTGAGTGGTTGAAACCGGCGGTCTTGAAAACCGTTAGGCCCTTTTGGGTC
TCGCAGGTTCGAATCCTGCTCCTTCCGCCA
Downstream region at tRNA end position 
atcccgattt
Secondary structure (Cloverleaf model)
>WENV170018070	Ser	TGA
                   t      GCCA atcccgattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G T G G       G C A G G     C
    G         | | |                 T T
    T       A A C C
      T G A        G     TAGGCCCTTTTGGGTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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