The detailed information of tRNA gene sequence


Sequence ID>WENV170018074
Genome IDBARV01009580
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 817
End posion on genome 743
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cggaaaatac
tRNA gene sequence 
AGGCACGTAGCTCAGGGGGAGAGCGCTACCTTGACACGGTAGAGGTCGTTGGTTCAAATC
CAATCGTGCCTACCA
Downstream region at tRNA end position 
tcaaaaaccg
Secondary structure (Cloverleaf model)
>WENV170018074	Val	GAC
                   c      ACCA tcaaaaaccg
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     T A A C C     A
        G A        A      + | | | |     A
      G     C T C G       G T T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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