The detailed information of tRNA gene sequence


Sequence ID>WENV170018081
Genome IDBARV01010868
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 696
End posion on genome 623
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
agacaactat
tRNA gene sequence 
GGGCCTGTAGTTTAGTGGTAGAGCACTACTTTCGCATAGTAGAGACGGCAGTTCAATTCT
GCCCAGGTCCACCA
Downstream region at tRNA end position 
taatattata
Secondary structure (Cloverleaf model)
>WENV170018081	Ala	CGC
                   t      ACCA taatattata
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     C C G T C     A
        G A        A      | | | | |     A
      T     T T T G       G G C A G     C
      G     + | + |                 T T
      G     G A G C
        T A        A     AGAC
                    C - G
                    T - A
                    A - T
                    C - G
                    T - A
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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