The detailed information of tRNA gene sequence


Sequence ID>WENV170018084
Genome IDBARV01010929
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 636
End posion on genome 561
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
catctaaaat
tRNA gene sequence 
GCCGATGTAGCTCAGTTGGTAGAGCATTCCCATGGTAAGGGAAAGGTCAGCGGTTCAACT
CCGCTCATCGGCTCCA
Downstream region at tRNA end position 
ccacgcttta
Secondary structure (Cloverleaf model)
>WENV170018084	Thr	GGT
                   t      TCCA ccacgcttta
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     T C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    T - A
                    C - G
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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