The detailed information of tRNA gene sequence


Sequence ID>WENV170018090
Genome IDBARV01011870
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 539
End posion on genome 610
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tacaatccgt
tRNA gene sequence 
GCCTCGGTAGCATAGTGGTAGTGCAACGGATTCGTAATCCGTAGAGCGAGGGTTCAAATC
CCTTCCGAGGCTtat
Downstream region at tRNA end position 
caatcgtgtt
Secondary structure (Cloverleaf model)
>WENV170018090	Thr	CGT
                   t      Ttat caatcgtgtt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
        G A        A      + | | | |     A
      T     T A C G       G A G G G     C
      G     + | | |                 T T
      G     G T G C
        T A        A     AGAGC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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