The detailed information of tRNA gene sequence


Sequence ID>WENV170018092
Genome IDBARV01012354
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 467
End posion on genome 542
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatagggctg
tRNA gene sequence 
TACGGGGTAGTCTAGTATGGAAGCAGGCAGTAGGCTCATAACCTATGGTACGTAAGTTCA
AATCTTGCCCCCGTAAtct
Downstream region at tRNA end position 
gggcctgtgg
Secondary structure (Cloverleaf model)
>WENV170018092	Met	CAT
                   g      Atct gggcctgtgg
                     T - A
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T T C     A
    A T G A        A      | + | | |     A
  T         T C T G       G T A A G     C
  G         | | + |                 T T
  G         A G G C
    A A G C        A     GGTAC
                    G + T
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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