The detailed information of tRNA gene sequence


Sequence ID>WENV170018093
Genome IDBARV01012354
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 546
End posion on genome 622
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cccgtaatct
tRNA gene sequence 
GGGCCTGTGGTCTAATCCGGAATGACAGCGGTTTTGCATACCGTTAACTGAGGGTTCAAA
TCCCTCTGGGTCCACTA
Downstream region at tRNA end position 
aatgcnnnnn
Secondary structure (Cloverleaf model)
>WENV170018093	Ala	TGC
                   t      ACTA aatgcnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T + G
                     G + T          T A
                    T     C T C C C     A
      T A A        G      | | | | |     A
    C       T C T G       G A G G G     C
    C         | | |                 T T
    G       T G A C
      G A A        A     TAACT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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