The detailed information of tRNA gene sequence


Sequence ID>WENV170018097
Genome IDBARV01012594
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 326
End posion on genome 408
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atattttaaT
tRNA gene sequence 
GCCTCAGTCGCGTAATGGTATCGCAAGAGATTGCTAATCTCTGCCCTTCGGGGCTCGCAG
GTTCGATTCCTGTCTGAGGCGTtt
Downstream region at tRNA end position 
tatttaacag
Secondary structure (Cloverleaf model)
>WENV170018097	Ser	GCT
                   T      GTtt tatttaacag
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     T G T C C     A
        A A        C      + | | | |     G
      T     T G C G       G C A G G     C
      G       | | |                 T T
      G     T C G C
        T A        A     GCCCTTCGGGGCTC
                    A - T
                    G - C
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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