The detailed information of tRNA gene sequence


Sequence ID>WENV170018101
Genome IDBARV01013447
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 83
End posion on genome 8
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaattatta
tRNA gene sequence 
AGGTCCGTAGCTCCAACGGCAGAGCACTGGACTCCAAATCCGGGGGTTGCAGGTTCAAAT
CCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
tttttttnnn
Secondary structure (Cloverleaf model)
>WENV170018101	Trp	CCA
                   a      GCCA tttttttnnn
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      A A C        A      | | | | |     A
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    T + G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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