The detailed information of tRNA gene sequence


Sequence ID>WENV170018104
Genome IDBARV01014653
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 867
End posion on genome 779
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attattattt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTAAAGCGGCGGTCTCGAAAACCGTTGAGGGTTAATAACCCTT
CGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
atcaaaaaaa
Secondary structure (Cloverleaf model)
>WENV170018104	Ser	CGA
                   t      GCCA atcaaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
        G A        G      | | | | |     G
      T     G T C G       G T G G G     C
      G       | | |                 T T
      G     A A G C
        T A        G     TGAGGGTTAATAACCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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