The detailed information of tRNA gene sequence


Sequence ID>WENV170018116
Genome IDBARV01015487
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 539
End posion on genome 446
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaagataag
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGTTCGCTTGGAGAGCGATTGGGCGGCCATAAGC
TGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttttatat
Secondary structure (Cloverleaf model)
>WENV170018116	Ser	GGA
                   g      GCCA gtttttatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G C G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TGGGCGGCCATAAGCTGTCTC
                    T   T
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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