The detailed information of tRNA gene sequence


Sequence ID>WENV170018118
Genome IDBARV01015890
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 88
End posion on genome 175
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acggtgcgaa
tRNA gene sequence 
GGAGAGGTGTCGGAGTGGCTTATCGAGCCGGTTTCGAAAACCGGTGTACCCTTTATGGGT
GCCGCGGGTTCGAATCCCGCCCTCTCCGgta
Downstream region at tRNA end position 
tattttaagc
Secondary structure (Cloverleaf model)
>WENV170018118	Ser	CGA
                   a      Ggta tattttaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G G C T       G C G G G     C
    G       + | | |                 T T
    C       T C G A
      T T A        G     TGTACCCTTTATGGGTGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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