The detailed information of tRNA gene sequence


Sequence ID>WENV170018121
Genome IDBARV01016225
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 506
End posion on genome 431
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aaatagtttt
tRNA gene sequence 
GGGGCAGTGGCGCAATTGGGAGCGCACCAGAATCGCACTCTGGGGGTTACGGGTTCAAGT
CCCGTCTGCTCCACCA
Downstream region at tRNA end position 
aaaccacaga
Secondary structure (Cloverleaf model)
>WENV170018121	Ala	CGC
                   t      ACCA aaaccacaga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T A A        G      | | | | |     A
    T       C G C G       A C G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          A     GGGTT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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