The detailed information of tRNA gene sequence


Sequence ID>WENV170018122
Genome IDBARV01016402
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 505
End posion on genome 432
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tgtgcttatg
tRNA gene sequence 
CGGGGCGTGGCGCAGTTTGGTAGCGCGCTTGACTGGGGGTCAAGAGGTCGCTGGTTCAAG
TCCAGTCGCCCCGAgtt
Downstream region at tRNA end position 
tcataagttc
Secondary structure (Cloverleaf model)
>WENV170018122	Pro	GGG
                   g      Agtt tcataagttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G A C C     A
      T G A        G      + | | | |     A
    T       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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