The detailed information of tRNA gene sequence


Sequence ID>WENV170018123
Genome IDBARV01016999
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 125
End posion on genome 48
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctataatagg
tRNA gene sequence 
CGGGGCGTAGCGCAGTCCGGTTAGCGCGCAGCGTTCGGGACGCTGAGGTCGGAGGTTCGA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttctattcta
Secondary structure (Cloverleaf model)
>WENV170018123	Pro	CGG
                   g      ACCA ttctattcta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     G
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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