The detailed information of tRNA gene sequence


Sequence ID>WENV170018130
Genome IDBARV01017550
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 135
End posion on genome 58
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttactaagaT
tRNA gene sequence 
GCCCTCGTAGTTCAGATGGATAGAACAGCCCTTTTGCGTAGGCGCAGGTCGTGGGTTCAA
GTCCCACCGAGGGTATCt
Downstream region at tRNA end position 
acaatggaac
Secondary structure (Cloverleaf model)
>WENV170018130	Ala	TGC
                   T      ATCt acaatggaac
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C A C C C     A
      A G A        A      | | | | |     A
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      A T A        A     CAGGTC
                    G   G
                    C   C
                    C - G
                    C - G
                    T - A
                  T       T
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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