The detailed information of tRNA gene sequence


Sequence ID>WENV170018135
Genome IDBARV01018069
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 512
End posion on genome 603
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agctccagtg
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGCCGCCTGCTAAGCGGTTACCCTGAGAAATCGG
GGTCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
gcagttaaat
Secondary structure (Cloverleaf model)
>WENV170018135	Ser	GCT
                   g      GCCA gcagttaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TACCCTGAGAAATCGGGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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