The detailed information of tRNA gene sequence


Sequence ID>WENV170018138
Genome IDBARV01018699
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 255
End posion on genome 329
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atagagatgt
tRNA gene sequence 
GGGGAGTTAGCTCAGCTTGGTAGAGCGTTCGGTTCACATCCGAGAGGTCAGAGGTTCAAG
TCCTCTACTCCCCACtg
Downstream region at tRNA end position 
aatgtatatt
Secondary structure (Cloverleaf model)
>WENV170018138	Val	CAC
                   t      ACtg aatgtatatt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A          T G
                    T     T C T C C     A
      C G A        A      | | | | |     A
    T       C T C G       A G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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