The detailed information of tRNA gene sequence


Sequence ID>WENV170018142
Genome IDBARV01018803
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 95
End posion on genome 170
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttctattttt
tRNA gene sequence 
GGGCCCATGGCGCAGTTGGTAGCGCGCATCCGTGGCACGGATGAGGTCGCGAGTTCGAAT
CTCGCTGGGTCCACAA
Downstream region at tRNA end position 
gaaaaaccta
Secondary structure (Cloverleaf model)
>WENV170018142	Ala	GGC
                   t      ACAA gaaaaaccta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    T       C G C G       G C G A G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  G       C
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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