The detailed information of tRNA gene sequence


Sequence ID>WENV170018150
Genome IDBARV01020058
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 533
End posion on genome 609
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gggtagccat
tRNA gene sequence 
GGCGCATTCGTCTAGTGGCCTAGGACACCTCCCTCTCAAGGAGGAGATCACCGGTTCGAA
TCCGGTATGCGCTACCA
Downstream region at tRNA end position 
ccgcctatac
Secondary structure (Cloverleaf model)
>WENV170018150	Glu	CTC
                   t      ACCA ccgcctatac
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     T G G C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C C G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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