The detailed information of tRNA gene sequence


Sequence ID>WENV170018152
Genome IDBARV01020245
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 508
End posion on genome 434
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ccaactccat
tRNA gene sequence 
TCCCGAGTAGCTCAATGGTAGAGCAGGCGGCTGTTAACCGTCTGGTTGTAGGTTCGAGCC
CTACCTCGGGAGCCA
Downstream region at tRNA end position 
ttttatcgtt
Secondary structure (Cloverleaf model)
>WENV170018152	Asn	GTT
                   t      GCCA ttttatcgtt
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          C G
                    T     C A T C C     A
        A A        A      | | | | |     G
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTT
                    G - C
                    G + T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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