The detailed information of tRNA gene sequence


Sequence ID>WENV170018154
Genome IDBARV01020443
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 431
End posion on genome 508
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agtggaatat
tRNA gene sequence 
GGCGCATTCGTCTAGCGGTTTTAGGACACCTCCCTCTCAAGGAGGAGATCACCGGTTCGA
ATCCGGTATGCGCTACCA
Downstream region at tRNA end position 
attcatttgg
Secondary structure (Cloverleaf model)
>WENV170018154	Glu	CTC
                   t      ACCA attcatttgg
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     T G G C C     A
    G C G A        C      | | | | |     G
  G         T C T G       A C C G G     C
  T         + | | |                 T T
  T         G G A C
    T T A          A     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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