The detailed information of tRNA gene sequence


Sequence ID>WENV170018156
Genome IDBARV01020461
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 515
End posion on genome 605
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttgaagcta
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTCATGGTGCCGCTCTCGAAAAGCGGTCTCCGCTTAAAGCGG
AGCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctatgtaaaa
Secondary structure (Cloverleaf model)
>WENV170018156	Ser	CGA
                   a      GCCA ctatgtaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    T       T G G T
      T C A        G     TCTCCGCTTAAAGCGGAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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