The detailed information of tRNA gene sequence


Sequence ID>WENV170018157
Genome IDBARV01020461
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 645
End posion on genome 733
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaccaagag
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGTCTAACAGGCGCGCCTGGAGAGCGCGTGTAGCCTTTGGCTAC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttccctttaa
Secondary structure (Cloverleaf model)
>WENV170018157	Ser	GGA
                   g      GCCA ttccctttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G         | | |                 T T
    T       A C A G
      C T A        G     TGTAGCCTTTGGCTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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