The detailed information of tRNA gene sequence


Sequence ID>WENV170018160
Genome IDBARV01020516
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 259
End posion on genome 333
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcaatttaaT
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGTtt
Downstream region at tRNA end position 
tggagcgtat
Secondary structure (Cloverleaf model)
>WENV170018160	Trp	CCA
                   T      GTtt tggagcgtat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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