The detailed information of tRNA gene sequence


Sequence ID>WENV170018162
Genome IDBARV01020810
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 199
End posion on genome 275
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tagtagttat
tRNA gene sequence 
AGGGGTGTAGCTCAGTTGGTCAGAGCAGCGGTCTCCAAAACCGCAGGTCGCGGGTTCGAA
TCCTGCCGCCCCTGCCA
Downstream region at tRNA end position 
tgccggggtg
Secondary structure (Cloverleaf model)
>WENV170018162	Trp	CCA
                   t      GCCA tgccggggtg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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